BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006A06LP1|AL425459
(345 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1616 673 0.0
>3x_Contig1616
Length = 10468
Score = 673 bits (338), Expect = 0.0
Identities = 342/345 (99%)
Strand = Plus / Minus
Query: 1 atccaataagtcagagagcttaggaattttatctgttggattttttggggaccatatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7935 atccaataagtcagagagcttaggaattttatctgttggattttttggggaccatatatt 7876
Query: 61 aggttttggacccatgaccttgttgaacaatagatttatgaagtattcgctttgaatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7875 aggttttggacccatgaccttgttgaacaatagatttatgaagtattcgctttgaatgac 7816
Query: 121 agaatcatctaacgtatttcgctcgaacttgaaaagattcatcgtattgaagtttgaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7815 agaatcatctaacgtatttcgctcgaacttgaaaagattcatcgtattgaagtttgaagt 7756
Query: 181 taatattggaggcagctctttcaatgcaaacttcctggcataatcacacgttacggccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7755 taatattggaggcagctctttcaatgcaaacttcctggcataatcacacgttacggccac 7696
Query: 241 ccctttaggagtnggctgcmaaagaatgttctcttttggccgacttcttgtcttatccgc 300
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 7695 ccctttaggagtcggctgcaaaagaatgttctcttttggccgacttcttgtcttatccgc 7636
Query: 301 aggtgtatgtagtaatttagctttcataaaagtgttcmatagctg 345
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7635 aggtgtatgtagtaatttagctttcataaaagtgttcaatagctg 7591
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2460
Number of Sequences: 1807
Number of extensions: 2460
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 345
length of database: 10,358,551
effective HSP length: 16
effective length of query: 329
effective length of database: 10,329,639
effective search space: 3398451231
effective search space used: 3398451231
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)